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Adapter trimming: Why are adapter sequences trimmed from only the 3' ends of reads - Illumina Knowledge
SECAPR—a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments [PeerJ]
The Basic Alignment Workflow - Core NGS Tools - UT Austin Wikis
Illumina adapter sequences - gogosalo
Which Trimmomatic adapter file cuts the "Illumina Universal Adapter"?
BecA Bioinformatics
Mostly natural sequencing-by-synthesis for scRNA-seq using Ultima sequencing | Nature Biotechnology
Contamination-controlled high-throughput whole genome sequencing for influenza A viruses using the MiSeq sequencer | Scientific Reports
SARS-CoV-2 Genome Assembly and Annotation Service | BV-BRC
Frontiers | Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp
MetaWorks: A flexible, scalable bioinformatic pipeline for high-throughput multi-marker biodiversity assessments | PLOS ONE
UCD Bioinformatics Core RNA-Seq Workshop
Biomolecules | Free Full-Text | High-Throughput Identification of Adapters in Single-Read Sequencing Data
de novo assembly of Illumina reads using Velvet (Galaxy) - Bioinformatics Documentation
Workflow for repeat analysis in this study. Raw data from... | Download Scientific Diagram
First steps with NGS data
Trimming Illumina adapter sequences
First steps with NGS data
From next-generation resequencing reads to a high-quality variant data set | Heredity
Development and validation of a high throughput SARS-CoV-2 whole genome sequencing workflow in a clinical laboratory | Scientific Reports
Issues with SARS-CoV-2 sequencing data - nCoV-2019 Genomic Epidemiology - Virological
A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform | Microbiome | Full Text
Trimming Illumina universal adapters using cutadapt proving insufficient
FASTAptamer: A Bioinformatic Toolkit for High-throughput Sequence Analysis of Combinatorial Selections: Molecular Therapy - Nucleic Acids
A single test approach for accurate and sensitive detection and taxonomic characterization of Trypanosomes by comprehensive anal
de novo assembly of Illumina reads using Velvet (Galaxy) - Bioinformatics Documentation